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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2451: 10819 - Hypothetical Protein, at 163388 to 164949
10819
mRNA_2452: 10820 - HMMPfam-Ribonuclease H2 non-catalytic subunit (Ylr154p-like)-PF08615, at 165209 to 166286
10820
mRNA_2453: 10821 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 166755 to 168701
10821
mRNA_2454: 10822 - K12823 DDX5, DBP2 ATP-dependent RNA helicase DDX5/DBP2, at 169687 to 172594
10822
mRNA_2455: 10823 - K16912 LAS1 ribosomal biogenesis protein LAS1, at 172733 to 174671
10823
Group
Condition
mRNA_2451
mRNA_2452
mRNA_2453
mRNA_2454
mRNA_2455
10819
10820
10821
10822
10823
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
-0.2
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.8
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.4
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.5
0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.4
0.2
-0.2
growth on ricinoleic acid
YNB Glucose
-0.6
0.3
-0.2
growth on oleic acid
YNB Glucose
-0.5
0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.7
0.5
-0.1
auxotrophy
Dropout Complete
-0.2
-0.3
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
0.6
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.2
-0.1
growth on ypd
YPD
0.2
-0.3
0.1
growth on oleic acid
YNB Oleic Acid
-0.7
0.5
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.4
0.3
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.5
-0.3
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
0.7
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.4
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.4
0.1
auxotrophy
YNB Glucose
0.1
0.4
0.3
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