Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2450: 10818 - KOG3037 Cell membrane glycoprotein, at 161540 to 163035 10818 mRNA_2451: 10819 - Hypothetical Protein, at 163388 to 164949 10819 mRNA_2452: 10820 - HMMPfam-Ribonuclease H2 non-catalytic subunit (Ylr154p-like)-PF08615, at 165209 to 166286 10820 mRNA_2453: 10821 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 166755 to 168701 10821 mRNA_2454: 10822 - K12823 DDX5, DBP2 ATP-dependent RNA helicase DDX5/DBP2, at 169687 to 172594 10822
Group Condition mRNA_2450 mRNA_2451 mRNA_2452 mRNA_2453 mRNA_2454
10818
10819
10820
10821
10822
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 -0.6 -0.2 -0.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2 -0.8 -0.1  
growth on ricinoleic acid YNB Glucose -0.7 -0.6 0.3 -0.2  
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.3 -0.4 0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 -0.6 0.6 -0.1  
auxotrophy YNB Glucose 75mM Arginine -0.7 -0.2 0.2 -0.1  
growth on oleic acid YNB Glucose -0.4 -0.5 0.2 -0.1  
auxotrophy Dropout Complete -0.4 -0.2 -0.3 0.3  
growth on oleic acid YNB Oleic Acid -0.5 -0.7 0.5 0.2  
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.4 0.2 -0.2  
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.7 0.5 -0.1  
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.3 -0.5 0.4  
auxotrophy YNB Glucose 75mM Methionine -0.6 0.1 0.4 0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.1 0.3 -0.1  
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.4 0.3 0.1  
auxotrophy YNB Glucose -0.4 0.1 0.4 0.3  
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.3 0.7 -0.1  
growth on ypd YPD 0.6 0.2 -0.3 0.1  
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 0.5 -0.3 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.2 0.2 -0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.1 0.4 -0.0  
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