Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2443: 10811 - HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113, at 143347 to 145508 10811 mRNA_2444: 10812 - KOG4505 Na+/H+ antiporter, at 145860 to 150269 10812 mRNA_2445: 10813 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 151366 to 153133 10813 mRNA_2446: 10814 - K11396 YNG2, EAF4 chromatin modification-related protein YNG2, at 153501 to 155365 10814 mRNA_2447: 10815 - Hypothetical Protein, at 155632 to 156162 10815
Group Condition mRNA_2443 mRNA_2444 mRNA_2445 mRNA_2446 mRNA_2447
10811
10812
10813
10814
10815
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -4.1 -0.0   0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -2.3 0.0   -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 -0.9 -0.1   0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -1.9 -0.1   -0.0
growth on oleic acid YNB Oleic Acid -1.0 -0.2 0.1   0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.5 -0.6   0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 0.2 -0.2   -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 0.2 -0.3   0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.5 0.1   -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -1.1 0.4   0.2
ypd buoyancy 40 hrs High Buoyancy 0.0 0.1 -0.5   -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 0.1 0.0   -0.2
growth on oleic acid YNB Glucose -0.2 -0.1 -0.0   0.2
auxotrophy Dropout Complete -0.2 0.2 -0.1   -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 -0.3   0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 0.4   -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 0.4 0.1   -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.1 0.5   0.0
growth on ricinoleic acid YNB Glucose -0.2 0.6 -0.1   0.1
growth on ypd YPD -0.4 0.3 0.7   -0.1
auxotrophy YNB Glucose 0.1 0.4 0.1   -0.1
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