Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2441: 10809 - KOG1284 Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase, at 138011 to 140441 10809 mRNA_2442: 10810 - HMMPfam-ACT domain-PF13840,SUPERFAMILY--SSF55021, at 140857 to 142808 10810 mRNA_2443: 10811 - HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113, at 143347 to 145508 10811 mRNA_2444: 10812 - KOG4505 Na+/H+ antiporter, at 145860 to 150269 10812 mRNA_2445: 10813 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 151366 to 153133 10813
Group Condition mRNA_2441 mRNA_2442 mRNA_2443 mRNA_2444 mRNA_2445
10809
10810
10811
10812
10813
facs on lipid accumulation Sorted Low BODIPY Gate -2.2 -0.5 -0.5 -4.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -1.4 0.1 -0.2 -2.3 0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.8 -0.0 -0.0 -1.9 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.6 -1.4 -0.9 -0.1
growth on oleic acid YNB Oleic Acid 0.3 -0.8 -1.0 -0.2 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1 -0.7 0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.5 -0.8 0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.1 0.0 -0.5 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.2 0.0 0.0 0.1 -0.5
growth on oleic acid YNB Glucose 0.6 -0.5 -0.2 -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.3 -0.1 0.1 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.4 -0.3 -0.5 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.4 0.0 -1.1 0.4
auxotrophy Dropout Complete 0.2 -0.2 -0.2 0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 0.1 0.1 -0.3
growth on ricinoleic acid YNB Glucose 0.3 -0.4 -0.2 0.6 -0.1
auxotrophy YNB Glucose -0.3 -0.0 0.1 0.4 0.1
growth on ypd YPD 0.0 -0.1 -0.4 0.3 0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.4 0.0 -0.1 0.5
auxotrophy YNB Glucose 75mM Methionine 0.5 0.1 -0.1 0.4 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.0 -0.2 -0.1 -0.1 0.4
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