Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2417: 10785 - SUPERFAMILY--SSF52047, at 74792 to 76110 10785 mRNA_2418: 10786 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 77070 to 79296 10786 mRNA_2419: 10787 - HMMPfam-Domain of unknown function (DUF4385)-PF14328, at 79410 to 80151 10787 mRNA_2420: 10788 - KOG2618 Uncharacterized conserved protein, at 80430 to 82352 10788 mRNA_2421: 10789 - K11800 WDR22, BCRP2 WD repeat-containing protein 22, at 82479 to 84495 10789
Group Condition mRNA_2417 mRNA_2418 mRNA_2419 mRNA_2420 mRNA_2421
10785
10786
10787
10788
10789
growth on ypd YPD -0.5 -0.0 0.3 -0.4 -0.6
auxotrophy Dropout Complete -0.0 -0.1 -0.2 -0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 0.4 -0.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.1 -0.2 0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 0.1 0.1 0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 0.2 -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.5 0.1 -0.3 0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.0 0.3 -0.1 0.2 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 0.3 0.2 0.3 -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.2 0.2 -0.3 0.1
auxotrophy YNB Glucose -0.2 -0.0 0.3 -0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 0.3 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.3 0.2 -0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.4 0.2 -0.2 0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.3 0.3 -0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 0.6 0.2 0.5 -0.9
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 0.4 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.2 -0.4 0.2 0.1
growth on oleic acid YNB Glucose -0.1 0.1 0.1 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 0.3 0.0 0.1 0.2
growth on oleic acid YNB Oleic Acid 0.2 0.1 0.0 0.1 0.1
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