Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2416: 10784 - SUPERFAMILY--SSF51445, at 72061 to 74634 10784 mRNA_2417: 10785 - SUPERFAMILY--SSF52047, at 74792 to 76110 10785 mRNA_2418: 10786 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 77070 to 79296 10786 mRNA_2419: 10787 - HMMPfam-Domain of unknown function (DUF4385)-PF14328, at 79410 to 80151 10787 mRNA_2420: 10788 - KOG2618 Uncharacterized conserved protein, at 80430 to 82352 10788
Group Condition mRNA_2416 mRNA_2417 mRNA_2418 mRNA_2419 mRNA_2420
10784
10785
10786
10787
10788
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.2 -0.4 0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.4 0.1 -0.2 0.1
growth on ypd YPD 0.0 -0.5 -0.0 0.3 -0.4
auxotrophy Dropout Complete -0.1 -0.0 -0.1 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 -0.3 0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.1 -0.0 0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 0.2 -0.4 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.3 -0.2 0.4 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.5 0.1 -0.3 0.3
growth on oleic acid YNB Glucose -0.3 -0.1 0.1 0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -1.0 0.3 -0.1 0.2
growth on ricinoleic acid YNB Glucose 0.3 -0.2 -0.2 0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.1 -0.1 0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.2 -0.3 0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 -0.8 0.1 0.1 0.1
auxotrophy YNB Glucose 0.1 -0.2 -0.0 0.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -1.0 0.3 0.2 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.6 0.3 0.0 0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.1 -0.0 0.4 -0.1
growth on oleic acid YNB Oleic Acid 0.1 0.2 0.1 0.0 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.5 0.6 0.2 0.5
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