Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2411: 10779 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF81383, at 60970 to 61863 10779 mRNA_2412: 10780 - K04378 SRF serum response factor, at 62318 to 64458 10780 mRNA_2413: 10781 - K13108 SNIP1 smad nuclear-interacting protein 1, at 64935 to 66206 10781 mRNA_2414: 10782 - KOG1185 Thiamine pyrophosphate-requiring enzyme, at 67466 to 70057 10782 mRNA_2415: 10783 - Hypothetical Protein, at 70099 to 71162 10783
Group Condition mRNA_2411 mRNA_2412 mRNA_2413 mRNA_2414 mRNA_2415
10779
10780
10781
10782
10783
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.2   0.5 -0.8
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.5   0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.3   -0.4 -0.4
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.1   -0.3 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.4   -0.2 -0.3
auxotrophy Dropout Complete -0.1 -0.1   0.2 -0.3
growth on ypd YPD -0.2 -0.1   -0.0 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.2   -0.1 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.0   -0.0 0.0
growth on oleic acid YNB Oleic Acid 0.1 -0.2   0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.4   0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.4   -0.1 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.2   0.0 -0.3
auxotrophy YNB Glucose -0.2 0.6   0.1 -0.3
growth on ricinoleic acid YNB Glucose -0.2 0.7   -0.0 -0.4
growth on oleic acid YNB Glucose -0.0 0.3   -0.1 0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 0.4   0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.4   0.2 0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 0.6   0.1 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 1.1   0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 1.3   -0.0 -0.2
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