Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2403: 10771 - HMMPfam-Protein of unknown function (DUF2462)-PF09495, at 37174 to 37596 10771 mRNA_2404: 10772 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 37941 to 40154 10772 mRNA_2405: 10773 - KOG1910 Uncharacterized conserved protein, at 41181 to 51337 10773 mRNA_2406: 10774 - KOG4111 Translocase of outer mitochondrial membrane complex, subunit TOM22, at 52047 to 52986 10774 mRNA_2407: 10775 - K10880 XRCC3 DNA-repair protein XRCC3, at 53086 to 55006 10775
Group Condition mRNA_2403 mRNA_2404 mRNA_2405 mRNA_2406 mRNA_2407
10771
10772
10773
10774
10775
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 0.2 -0.5 -0.3 -2.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.1 -0.4 -0.5 -1.2
facs on lipid accumulation Sorted High BODIPY Gate 0.6 0.2 0.4 -0.6 -2.7
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.1 -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.1 -1.2 0.0 0.2
growth on ypd YPD 0.1 0.2 0.1 -0.1 -1.0
growth on oleic acid YNB Oleic Acid -0.1 0.2 -0.2 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.1 0.3 -0.3 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.2 0.2 -0.3 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.3 0.2 -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.1 -0.2 0.6
growth on oleic acid YNB Glucose -0.2 0.3 0.7 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 0.0 0.3 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.3 0.2 0.7 0.0 0.0
growth on ricinoleic acid YNB Glucose -0.0 0.1 0.9 0.8 -1.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.0 0.3 0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.0 0.7 0.5 -0.2
auxotrophy Dropout Complete -0.2 0.3 0.6 0.6 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.3 0.1 0.3 0.6
auxotrophy YNB Glucose -0.2 0.4 0.9 0.3 0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 0.4 1.1 0.5 0.1
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