Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2401: 10769 - HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SMART-von Willebrand factor (vWF) type A domain-SM00327,SUPERFAMILY--SSF53300, at 31394 to 33493 10769 mRNA_2402: 10770 - K07870 RHOT1, ARHT1 Ras homolog gene family, member T1, at 33666 to 36845 10770 mRNA_2403: 10771 - HMMPfam-Protein of unknown function (DUF2462)-PF09495, at 37174 to 37596 10771 mRNA_2404: 10772 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 37941 to 40154 10772 mRNA_2405: 10773 - KOG1910 Uncharacterized conserved protein, at 41181 to 51337 10773
Group Condition mRNA_2401 mRNA_2402 mRNA_2403 mRNA_2404 mRNA_2405
10769
10770
10771
10772
10773
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.4 -0.5 -0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.1 0.1 0.1 -1.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 -0.1 -0.6 0.2 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 -0.1 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.4 0.1 0.3 0.1
growth on oleic acid YNB Oleic Acid -0.0 -0.1 -0.1 0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 0.2 -0.1 -0.1 -0.1
growth on ypd YPD -0.1 -0.4 0.1 0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.2 -0.1 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.1 -0.2 0.0 0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.0 0.0 0.3 0.2
growth on oleic acid YNB Glucose -0.1 -0.0 -0.2 0.3 0.7
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1 -0.3 0.2 0.7
auxotrophy Dropout Complete 0.1 0.0 -0.2 0.3 0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.1 0.6 0.2 0.4
growth on ricinoleic acid YNB Glucose -0.3 0.2 -0.0 0.1 0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.3 0.2 0.2 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.0 0.6 0.0 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.3 0.4 0.1 0.3
auxotrophy YNB Glucose 0.1 0.0 -0.2 0.4 0.9
auxotrophy YNB Glucose 75mM Methionine 0.3 0.3 0.2 0.4 1.1
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