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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2393: 10761 - HMMPfam-Prolyl oligopeptidase family-PF00326,HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474, at 13442 to 14834
10761
mRNA_2394: 10762 - K03648 UNG, UDG uracil-DNA glycosylase, at 15133 to 16619
10762
mRNA_2395: 10763 - SMART-catalytic domain of ctd-like phosphatases-SM00577, at 16868 to 18999
10763
mRNA_2396: 10764 - K14169 CTU2, NCS2 cytoplasmic tRNA 2-thiolation protein 2, at 19108 to 21174
10764
mRNA_2397: 10765 - Hypothetical Protein, at 21326 to 23910
10765
Group
Condition
mRNA_2393
mRNA_2394
mRNA_2395
mRNA_2396
mRNA_2397
10761
10762
10763
10764
10765
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.2
-2.8
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.1
-0.2
-0.9
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
0.3
-0.3
-0.4
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
-0.1
-0.8
0.0
growth on ypd
YPD
-0.1
-0.0
0.0
-0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
0.3
-0.0
-0.4
0.1
growth on ricinoleic acid
YNB Glucose
0.1
0.2
-0.2
-0.0
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.5
0.4
-1.0
0.1
auxotrophy
Dropout Complete
-0.0
0.1
-0.0
0.2
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.1
-0.1
0.4
0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.2
-0.3
0.4
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.6
-0.0
-0.6
0.4
growth on oleic acid
YNB Glucose
-0.2
-0.0
-0.0
0.7
0.1
auxotrophy
YNB Glucose
0.0
0.1
-0.1
0.3
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.4
-0.3
0.2
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.5
-0.1
-0.1
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.1
0.0
0.2
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.2
-0.0
0.3
0.1
growth on oleic acid
YNB Oleic Acid
-0.3
0.1
-0.0
1.0
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-0.2
-0.0
1.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.5
0.1
0.2
0.3
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