Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2380: 10748 - K07889 RAB5C Ras-related protein Rab-5C, at 756377 to 757308 10748 mRNA_2381: 10749 - KOG4660 Protein Mei2, essential for commitment to meiosis, and related proteins, at 757956 to 760560 10749 mRNA_2382: 10750 - HMMPfam-Zinc-binding loop region of homing endonuclease-PF05551,SUPERFAMILY--SSF54060, at 760691 to 762074 10750 mRNA_2383: 10751 - Hypothetical Protein, at 762665 to 764140 10751 mRNA_2384: 10752 - K11600 RRP41, EXOSC4, SKI6 exosome complex component RRP41, at 764160 to 765511 10752
Group Condition mRNA_2380 mRNA_2381 mRNA_2382 mRNA_2383 mRNA_2384
10748
10749
10750
10751
10752
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -1.3   -0.1  
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -2.5   0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.8   -0.6  
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -2.4   0.4  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -1.1   -0.0  
auxotrophy Dropout Complete 0.3 -1.1   -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.4   -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.4   -0.2  
growth on oleic acid YNB Oleic Acid -0.1 -0.3   -0.0  
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.1   -0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2   -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.5   0.2  
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.0   -0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.1   0.0  
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 0.7   -0.0  
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.1   0.0  
auxotrophy YNB Glucose 0.3 -0.0   -0.0  
growth on ypd YPD 0.2 0.3   -0.2  
growth on ricinoleic acid YNB Glucose 0.4 -0.0   0.0  
ypd buoyancy 40 hrs High Buoyancy 0.0 0.5   -0.2  
growth on oleic acid YNB Glucose 0.4 0.7   -0.1  
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