Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2363: 10731 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 709959 to 711160 10731 mRNA_2364: 10732 - K20471 COPD, ARCN1, RET2 coatomer subunit delta, at 712006 to 714085 10732 mRNA_2365: 10733 - HMMPfam-C2 domain-PF00168,HMMPfam-Munc13 (mammalian uncoordinated) homology domain-PF10540,ProSiteProfiles-Munc13-homology domain 1 (MHD1) profile.-PS51258,ProSiteProfiles-Munc13-homology domain 2 (MHD2) profile.-PS51259,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 714836 to 719439 10733 mRNA_2366: 10734 - HMMPfam-GDP/GTP exchange factor Sec2p-PF06428,SUPERFAMILY--SSF144284, at 719929 to 722612 10734 mRNA_2367: 10735 - HMMPfam-Salt tolerance down-regulator-PF13945, at 723290 to 728071 10735
Group Condition mRNA_2363 mRNA_2364 mRNA_2365 mRNA_2366 mRNA_2367
10731
10732
10733
10734
10735
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 1.3 -2.6 0.4  
ypd buoyancy 40 hrs High Buoyancy -0.1 0.2 -0.7 -0.0  
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.7 -0.3 0.3  
growth on ricinoleic acid YNB Glucose 0.0 0.3 -1.1 0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 1.4 -2.5 0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.6 -1.2 0.3  
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.0 -0.4 -0.2  
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.2 -0.6 0.5  
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.3 -0.5 0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.9 -1.0 -0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 -0.8 0.4  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.2 -0.6 0.4  
auxotrophy YNB Glucose -0.2 1.0 -0.7 0.0  
growth on oleic acid YNB Oleic Acid -0.6 0.9 -0.2 0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.6 -0.8 0.3  
growth on oleic acid YNB Glucose -0.2 0.5 -0.3 0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.1 -0.0 0.4  
auxotrophy YNB Glucose 75mM Methionine -0.2 1.4 -0.6 0.0  
auxotrophy YNB Glucose 75mM Arginine 0.0 1.1 -0.4 0.0  
growth on ypd YPD 0.4 0.4 0.5 -0.0  
auxotrophy Dropout Complete 0.0 1.8 0.0 -0.1  
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