Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2361: 10729 - Hypothetical Protein, at 703418 to 705625 10729 mRNA_2362: 10730 - HMMPfam-Pentatricopeptide repeat domain-PF13812, at 706631 to 709566 10730 mRNA_2363: 10731 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 709959 to 711160 10731 mRNA_2364: 10732 - K20471 COPD, ARCN1, RET2 coatomer subunit delta, at 712006 to 714085 10732 mRNA_2365: 10733 - HMMPfam-C2 domain-PF00168,HMMPfam-Munc13 (mammalian uncoordinated) homology domain-PF10540,ProSiteProfiles-Munc13-homology domain 1 (MHD1) profile.-PS51258,ProSiteProfiles-Munc13-homology domain 2 (MHD2) profile.-PS51259,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 714836 to 719439 10733
Group Condition mRNA_2361 mRNA_2362 mRNA_2363 mRNA_2364 mRNA_2365
10729
10730
10731
10732
10733
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2   -0.1 1.3 -2.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.4   -0.1 -0.7 -0.3
growth on ricinoleic acid YNB Glucose -0.4   0.0 0.3 -1.1
ypd buoyancy 40 hrs High Buoyancy -0.2   -0.1 0.2 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.1   0.4 1.4 -2.5
facs on lipid accumulation Sorted No BODIPY Gate 0.1   -0.2 0.2 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.3   0.1 0.2 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.2   0.0 0.3 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2   0.2 0.6 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6   -0.1 0.6 -1.2
ypd buoyancy 40 hrs Low Buoyancy -0.0   0.0 0.9 -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   0.1 0.3 -0.8
auxotrophy YNB Glucose -0.1   -0.2 1.0 -0.7
growth on oleic acid YNB Glucose 0.0   -0.2 0.5 -0.3
growth on oleic acid YNB Oleic Acid 0.1   -0.6 0.9 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.3   -0.2 1.4 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.3   0.0 1.1 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.5   0.2 -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5   0.1 0.1 -0.0
growth on ypd YPD 0.4   0.4 0.4 0.5
auxotrophy Dropout Complete 0.1   0.0 1.8 0.0
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