Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2360: 10728 - Hypothetical Protein, at 702511 to 702996 10728 mRNA_2361: 10729 - Hypothetical Protein, at 703418 to 705625 10729 mRNA_2362: 10730 - HMMPfam-Pentatricopeptide repeat domain-PF13812, at 706631 to 709566 10730 mRNA_2363: 10731 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 709959 to 711160 10731 mRNA_2364: 10732 - K20471 COPD, ARCN1, RET2 coatomer subunit delta, at 712006 to 714085 10732
Group Condition mRNA_2360 mRNA_2361 mRNA_2362 mRNA_2363 mRNA_2364
10728
10729
10730
10731
10732
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.4   -0.1 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.8 -0.2   0.2 0.6
facs on lipid accumulation Sorted High BODIPY Gate -1.1 -0.3   0.1 0.2
ypd buoyancy 40 hrs High Buoyancy -1.0 -0.2   -0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 0.5   0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.5 0.1   -0.2 0.2
growth on oleic acid YNB Glucose -0.6 0.0   -0.2 0.5
growth on ypd YPD -1.3 0.4   0.4 0.4
growth on ricinoleic acid YNB Glucose 0.2 -0.4   0.0 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.2   0.0 0.3
growth on oleic acid YNB Oleic Acid -0.2 0.1   -0.6 0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.5   0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.3   0.1 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.6   -0.1 0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.2   -0.1 1.3
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.3   0.0 1.1
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.3   -0.2 1.4
auxotrophy YNB Glucose 0.3 -0.1   -0.2 1.0
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.0   0.0 0.9
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.1   0.4 1.4
auxotrophy Dropout Complete 0.3 0.1   0.0 1.8
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