Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2359: 10727 - K02927 RP-L40e, RPL40 large subunit ribosomal protein L40e, at 700994 to 701674 10727 mRNA_2360: 10728 - Hypothetical Protein, at 702511 to 702996 10728 mRNA_2361: 10729 - Hypothetical Protein, at 703418 to 705625 10729 mRNA_2362: 10730 - HMMPfam-Pentatricopeptide repeat domain-PF13812, at 706631 to 709566 10730 mRNA_2363: 10731 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 709959 to 711160 10731
Group Condition mRNA_2359 mRNA_2360 mRNA_2361 mRNA_2362 mRNA_2363
10727
10728
10729
10730
10731
buoyancy on lipid accumulation 40 hrs High Buoyancy   -1.8 -0.2   0.2
facs on lipid accumulation Sorted High BODIPY Gate   -1.1 -0.3   0.1
ypd buoyancy 40 hrs High Buoyancy   -1.0 -0.2   -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   -0.5 -0.4   -0.1
growth on oleic acid YNB Glucose   -0.6 0.0   -0.2
growth on oleic acid YNB Oleic Acid   -0.2 0.1   -0.6
ypd buoyancy 40 hrs No Buoyancy Separation   -1.4 0.5   0.2
facs on lipid accumulation Sorted No BODIPY Gate   -0.5 0.1   -0.2
growth on ypd YPD   -1.3 0.4   0.4
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2 -0.2   -0.1
auxotrophy YNB Glucose 75mM Methionine   0.2 -0.3   -0.2
growth on ricinoleic acid YNB Glucose   0.2 -0.4   0.0
auxotrophy YNB Glucose 75mM Arginine   0.1 -0.3   0.0
ypd buoyancy 40 hrs Median Buoyancy   0.1 -0.2   0.0
auxotrophy YNB Glucose   0.3 -0.1   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.4 0.5   0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.3 0.3   0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.2 0.6   -0.1
ypd buoyancy 40 hrs Low Buoyancy   0.3 -0.0   0.0
auxotrophy Dropout Complete   0.3 0.1   0.0
growth on ricinoleic acid YNB Ricinoleic Acid   0.3 -0.1   0.4
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