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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2357: 10725 - BLAST Immunoglobulin-like domain contaning protein [Rho..., at 698588 to 700327
10725
mRNA_2358: 10726 - Hypothetical Protein, at 700328 to 700780
10726
mRNA_2359: 10727 - K02927 RP-L40e, RPL40 large subunit ribosomal protein L40e, at 700994 to 701674
10727
mRNA_2360: 10728 - Hypothetical Protein, at 702511 to 702996
10728
mRNA_2361: 10729 - Hypothetical Protein, at 703418 to 705625
10729
Group
Condition
mRNA_2357
mRNA_2358
mRNA_2359
mRNA_2360
mRNA_2361
10725
10726
10727
10728
10729
growth on oleic acid
YNB Glucose
-0.2
-1.4
-0.6
0.0
growth on oleic acid
YNB Oleic Acid
-0.3
-1.4
-0.2
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.5
-0.5
-0.4
growth on ypd
YPD
-0.4
0.3
-1.3
0.4
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.2
-1.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.8
-1.4
-0.5
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
1.1
-1.4
0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.1
0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
1.0
-1.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.4
0.0
0.1
-0.2
auxotrophy
YNB Glucose
-0.5
0.4
0.3
-0.1
auxotrophy
Dropout Complete
0.1
-0.4
0.3
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
2.3
-1.8
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.4
0.3
0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.7
0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
1.9
-0.3
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.8
1.3
-0.2
-0.2
growth on ricinoleic acid
YNB Glucose
0.8
1.5
0.2
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
2.1
-0.2
0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
1.6
0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
1.7
-0.4
0.5
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