Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_2337: 10705 - BLAST general substrate transporter [Wallemia mellicola..., at 656119 to 656520 10705 mRNA_2338: 10706 - K05545 DUS4 tRNA-dihydrouridine synthase 4, at 657491 to 659083 10706 mRNA_2339: 10707 - SUPERFAMILY--SSF55298, at 659249 to 660620 10707 mRNA_2340: 10708 - K06927 DPH6 diphthine-ammonia ligase, at 661039 to 662267 10708 mRNA_2341: 10709 - K03021 RPC2, POLR3B DNA-directed RNA polymerase III subunit RPC2, at 663077 to 667244 10709
Group Condition mRNA_2337 mRNA_2338 mRNA_2339 mRNA_2340 mRNA_2341
10705
10706
10707
10708
10709
growth on oleic acid YNB Oleic Acid -0.3 -0.5      
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.4      
growth on ypd YPD -0.6 -0.1      
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.4      
auxotrophy YNB Glucose -0.1 -0.6      
auxotrophy Dropout Complete -0.1 -0.5      
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.3      
growth on oleic acid YNB Glucose -0.2 -0.4      
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 0.2      
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.3      
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.6      
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.3      
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.1      
growth on ricinoleic acid YNB Glucose 0.0 -0.2      
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 0.3      
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.1      
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.0      
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.5      
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.4      
ypd buoyancy 40 hrs High Buoyancy 0.4 0.0      
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 1.0      
remove
mRNA_2337
plot		 remove
mRNA_2338
plot		 remove
mRNA_2339		 remove
mRNA_2340
plot		 remove
mRNA_2341
plot