Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2335: 10703 - K20098 ERCC6L2 DNA excision repair protein ERCC-6-like 2, at 648018 to 653331 10703 mRNA_2336: 10704 - KOG0254 Predicted transporter (major facilitator superfamily), at 653967 to 656080 10704 mRNA_2337: 10705 - BLAST general substrate transporter [Wallemia mellicola..., at 656119 to 656520 10705 mRNA_2338: 10706 - K05545 DUS4 tRNA-dihydrouridine synthase 4, at 657491 to 659083 10706 mRNA_2339: 10707 - SUPERFAMILY--SSF55298, at 659249 to 660620 10707
Group Condition mRNA_2335 mRNA_2336 mRNA_2337 mRNA_2338 mRNA_2339
10703
10704
10705
10706
10707
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.7 -0.3 -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.6 -0.7 0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.3 -0.3 -0.4  
auxotrophy Dropout Complete 0.3 -0.4 -0.1 -0.5  
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.3 -0.4 -0.4  
growth on oleic acid YNB Oleic Acid -0.0 0.0 -0.3 -0.5  
auxotrophy YNB Glucose 0.2 -0.2 -0.1 -0.6  
growth on ypd YPD 0.0 0.0 -0.6 -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.2 0.0 -0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.4 -0.4 0.3  
auxotrophy YNB Glucose 75mM Arginine 0.1 0.0 -0.2 -0.3  
growth on ricinoleic acid YNB Glucose 0.0 -0.2 0.0 -0.2  
growth on oleic acid YNB Glucose 0.2 0.1 -0.2 -0.4  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.0 -0.4 0.1  
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 0.1 0.0  
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 0.3 -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.1 0.2 -0.6  
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.7 -0.2 1.0  
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 0.4 0.0  
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.0 -0.3 0.5  
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.0 -0.1 0.4  
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