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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2316: 10684 - K02889 RP-L21e, RPL21 large subunit ribosomal protein L21e, at 591341 to 591961
10684
mRNA_2317: 10685 - K02264 COX5A cytochrome c oxidase subunit 5a, at 592707 to 594114
10685
mRNA_2318: 10686 - HMMPfam-Bromodomain associated-PF07524,HMMPfam-Transcription factor TFIID complex subunit 8 C-term-PF10406, at 594468 to 595983
10686
mRNA_2319: 10687 - KOG3872 FOG FHA domain, at 596131 to 598966
10687
mRNA_2320: 10688 - HMMPfam-Carboxylesterase family-PF00135,SUPERFAMILY--SSF53474, at 599987 to 602471
10688
Group
Condition
mRNA_2316
mRNA_2317
mRNA_2318
mRNA_2319
mRNA_2320
10684
10685
10686
10687
10688
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.7
-0.8
ypd buoyancy
40 hrs Median Buoyancy
-0.4
0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.6
0.2
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-0.4
0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.2
-0.3
growth on ypd
YPD
0.1
0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.0
0.9
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.6
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
1.0
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.7
-0.5
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.2
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
0.5
-0.4
growth on oleic acid
YNB Glucose
0.3
0.6
-0.1
growth on oleic acid
YNB Oleic Acid
0.2
0.8
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.2
1.3
-0.2
growth on ricinoleic acid
YNB Glucose
0.4
0.8
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
1.1
0.5
auxotrophy
Dropout Complete
0.6
1.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.2
1.7
0.2
auxotrophy
YNB Glucose
0.6
1.4
0.2
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