Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2314: 10682 - BLAST Valine--tRNA ligase [Rhizoctonia solani], at 585676 to 588935 10682 mRNA_2315: 10683 - SUPERFAMILY--SSF160369, at 589518 to 590435 10683 mRNA_2316: 10684 - K02889 RP-L21e, RPL21 large subunit ribosomal protein L21e, at 591341 to 591961 10684 mRNA_2317: 10685 - K02264 COX5A cytochrome c oxidase subunit 5a, at 592707 to 594114 10685 mRNA_2318: 10686 - HMMPfam-Bromodomain associated-PF07524,HMMPfam-Transcription factor TFIID complex subunit 8 C-term-PF10406, at 594468 to 595983 10686
Group Condition mRNA_2314 mRNA_2315 mRNA_2316 mRNA_2317 mRNA_2318
10682
10683
10684
10685
10686
growth on ricinoleic acid YNB Ricinoleic Acid -0.8     -1.0  
ypd buoyancy 40 hrs Low Buoyancy -0.3     -0.6  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6     -0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.0     -0.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2     -0.2  
growth on oleic acid YNB Oleic Acid -0.4     0.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.2     0.1  
ypd buoyancy 40 hrs No Buoyancy Separation -0.0     0.0  
growth on ricinoleic acid YNB Glucose -0.4     0.4  
auxotrophy YNB Glucose 75mM Methionine -0.1     0.2  
auxotrophy YNB Glucose 75mM Arginine 0.0     0.2  
ypd buoyancy 40 hrs High Buoyancy 0.2     0.1  
growth on oleic acid YNB Glucose 0.0     0.3  
growth on ypd YPD 0.4     0.1  
facs on lipid accumulation Sorted Low BODIPY Gate 0.5     0.0  
auxotrophy YNB Glucose -0.1     0.6  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3     0.2  
auxotrophy Dropout Complete 0.1     0.6  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2     0.5  
facs on lipid accumulation Sorted No BODIPY Gate 0.2     0.7  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4     0.6  
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