Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2308: 10676 - ProSiteProfiles-VWFA domain profile.-PS50234,SUPERFAMILY--SSF53300, at 573284 to 575347 10676 mRNA_2309: 10677 - K10703 PHS1, PAS2 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase, at 575716 to 577026 10677 mRNA_2310: 10678 - HMMPfam-AhpC/TSA antioxidant enzyme-PF13911,SUPERFAMILY--SSF52833, at 577390 to 579273 10678 mRNA_2311: 10679 - K20195 MON1 vacuolar fusion protein MON1, at 580011 to 582871 10679 mRNA_2312: 10680 - K00275 pdxH, PNPO pyridoxamine 5'-phosphate oxidase, at 583261 to 584055 10680
Group Condition mRNA_2308 mRNA_2309 mRNA_2310 mRNA_2311 mRNA_2312
10676
10677
10678
10679
10680
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1   -0.3 -1.2  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1   -0.5 -1.1  
auxotrophy YNB Glucose 75mM Arginine -0.2   -0.2 -0.9  
auxotrophy YNB Glucose -0.4   -0.2 -0.5  
auxotrophy YNB Glucose 75mM Methionine -0.3   0.1 -0.6  
facs on lipid accumulation Sorted High BODIPY Gate -0.4   0.4 -0.7  
growth on ricinoleic acid YNB Glucose -0.3   0.3 -0.6  
auxotrophy Dropout Complete -0.3   -0.1 -0.2  
growth on oleic acid YNB Oleic Acid 0.3   -0.3 -0.6  
growth on oleic acid YNB Glucose 0.3   0.0 -0.8  
facs on lipid accumulation Sorted Low BODIPY Gate -0.2   -0.3 0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.4   -0.2 0.2  
growth on ypd YPD 0.1   -0.3 -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation -0.2   -0.3 0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0   0.1 0.0  
ypd buoyancy 40 hrs Median Buoyancy 0.1   0.2 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4   0.1 0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.1   -0.1 0.7  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1   0.4 0.5  
ypd buoyancy 40 hrs High Buoyancy 0.2   0.0 1.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   0.1 1.3  
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