Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_2301: 10669 - HMMPfam-Transmembrane amino acid transporter protein-PF01490, at 560287 to 562676
10669
mRNA_2302: 10670 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 563015 to 564806
10670
mRNA_2303: 10671 - Hypothetical Protein, at 565712 to 566657
10671
mRNA_2304: 10672 - Hypothetical Protein, at 567046 to 568484
10672
mRNA_2305: 10673 - K01082 cysQ, MET22, BPNT1 3'(2'), 5'-bisphosphate nucleotidase, at 568703 to 570355
10673
Group
Condition
mRNA_2301
mRNA_2302
mRNA_2303
mRNA_2304
mRNA_2305
10669
10670
10671
10672
10673
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
0.2
-2.0
0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.9
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-1.4
-0.4
-0.1
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
-0.4
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.5
0.1
-0.2
growth on ricinoleic acid
YNB Glucose
0.2
-0.4
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.5
0.3
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.1
0.2
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
-0.1
-0.5
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.6
-0.5
0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.3
0.8
-0.3
auxotrophy
YNB Glucose
0.4
-0.4
0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.6
-0.0
0.4
0.1
auxotrophy
Dropout Complete
0.2
-0.2
0.4
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.2
-0.1
0.2
growth on oleic acid
YNB Oleic Acid
0.5
-0.1
0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.3
0.2
0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.3
0.6
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.0
0.5
0.2
ypd buoyancy
40 hrs High Buoyancy
0.2
0.0
0.2
-0.0
growth on ypd
YPD
0.1
0.4
0.4
0.2
remove
mRNA_2301
plot
remove
mRNA_2302
plot
remove
mRNA_2303
remove
mRNA_2304
plot
remove
mRNA_2305
plot