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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2296: 10664 - K05289 GAA1 glycosylphosphatidylinositol transamidase, at 549665 to 551990
10664
mRNA_2297: 10665 - HMMPfam-Acyltransferase-PF01553,SMART-Phosphate acyltransferases-SM00563,SUPERFAMILY--SSF69593, at 552680 to 555232
10665
mRNA_2298: 10666 - K15148 MED7 mediator of RNA polymerase II transcription subunit 7, at 555441 to 556485
10666
mRNA_2299: 10667 - Hypothetical Protein, at 557055 to 559337
10667
mRNA_2300: 10668 - Hypothetical Protein, at 559511 to 559996
10668
Group
Condition
mRNA_2296
mRNA_2297
mRNA_2298
mRNA_2299
mRNA_2300
10664
10665
10666
10667
10668
growth on oleic acid
YNB Glucose
-0.3
-0.5
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.5
0.0
-0.2
growth on ypd
YPD
0.2
-0.5
0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.2
0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.2
0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.0
-0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.2
0.5
-0.1
growth on ricinoleic acid
YNB Glucose
-0.2
-0.2
0.2
0.2
auxotrophy
YNB Glucose
-0.2
-0.2
0.5
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.3
0.3
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.4
-0.1
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.1
-0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.5
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
0.1
0.4
-0.2
auxotrophy
Dropout Complete
-0.2
0.0
0.5
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
0.8
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.1
0.4
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.2
0.9
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.2
0.8
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.2
0.5
0.1
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