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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2289: 10657 - KOG2454 Betaine aldehyde dehydrogenase, at 536074 to 538335
10657
mRNA_2290: 10658 - HMMPfam-GPR1/FUN34/yaaH family-PF01184, at 538803 to 539885
10658
mRNA_2291: 10659 - HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SUPERFAMILY--SSF53300, at 540927 to 542780
10659
mRNA_2292: 10660 - K01669 phrB deoxyribodipyrimidine photo-lyase, at 543301 to 545980
10660
mRNA_2293: 10661 - BLAST splicing arginine serine-rich 12 [Moesziomyces an..., at 546142 to 547358
10661
Group
Condition
mRNA_2289
mRNA_2290
mRNA_2291
mRNA_2292
mRNA_2293
10657
10658
10659
10660
10661
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.3
-0.5
-0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.0
-0.6
0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.1
-0.3
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.4
-0.1
-0.4
-0.1
0.1
growth on oleic acid
YNB Oleic Acid
-0.2
0.0
-0.4
0.2
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
0.4
-0.5
0.2
-0.4
growth on oleic acid
YNB Glucose
-0.7
0.1
-0.4
-0.0
0.5
growth on ypd
YPD
-0.5
-0.3
0.0
0.2
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
-0.3
0.7
-0.0
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
0.4
0.5
0.1
-0.5
growth on ricinoleic acid
YNB Glucose
-0.3
0.2
-0.2
0.2
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.1
0.4
-0.1
0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.0
1.3
0.1
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
0.5
0.4
0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
0.3
0.8
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.2
0.3
-0.1
0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
0.3
1.1
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.3
0.3
-0.0
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.4
0.5
0.2
-0.0
-0.2
auxotrophy
Dropout Complete
0.2
0.4
0.7
0.1
0.2
auxotrophy
YNB Glucose
0.3
0.5
0.5
0.2
0.3
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