Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2277: 10645 - K13717 OTUD3 OTU domain-containing protein 3, at 502464 to 504545 10645 mRNA_2278: 10646 - KOG1118 Lysophosphatidic acid acyltransferase endophilin/SH3GL, involved in synaptic vesicle formation, at 504709 to 506668 10646 mRNA_2279: 10647 - K16369 CHO2 phosphatidylethanolamine N-methyltransferase, at 506960 to 510896 10647 mRNA_2280: 10648 - HMMPfam-B-block binding subunit of TFIIIC-PF04182, at 511379 to 518850 10648 mRNA_2281: 10649 - K12190 VPS36, EAP45 ESCRT-II complex subunit VPS36, at 519083 to 521393 10649
Group Condition mRNA_2277 mRNA_2278 mRNA_2279 mRNA_2280 mRNA_2281
10645
10646
10647
10648
10649
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.5 -1.7   -2.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.2 -1.6   -2.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 -1.2   -2.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.2 -1.1   -2.3
auxotrophy YNB Glucose 75mM Methionine 0.1 0.0 -1.9   -1.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.1 -2.2   -1.1
auxotrophy YNB Glucose 0.1 0.2 -1.7   -1.6
auxotrophy Dropout Complete 0.2 0.2 -2.2   -1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.4 -1.4   -0.5
auxotrophy YNB Glucose 75mM Arginine 0.2 0.2 -1.9   -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.3 -0.9   -1.2
growth on oleic acid YNB Glucose -0.2 -0.3 -1.7   0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.4 -1.9   -0.5
growth on ricinoleic acid YNB Glucose 0.2 0.1 -1.7   -0.3
growth on oleic acid YNB Oleic Acid 0.1 -0.4 -1.1   0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.4 -0.5   0.2
growth on ypd YPD 0.1 -0.6 -0.0   0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.2 -0.2   -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.1 -0.2   0.7
ypd buoyancy 40 hrs High Buoyancy -0.0 0.5 -0.1   0.6
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.5 0.0   1.3
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