Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2276: 10644 - K02954 RP-S14, MRPS14, rpsN small subunit ribosomal protein S14, at 501721 to 502247 10644 mRNA_2277: 10645 - K13717 OTUD3 OTU domain-containing protein 3, at 502464 to 504545 10645 mRNA_2278: 10646 - KOG1118 Lysophosphatidic acid acyltransferase endophilin/SH3GL, involved in synaptic vesicle formation, at 504709 to 506668 10646 mRNA_2279: 10647 - K16369 CHO2 phosphatidylethanolamine N-methyltransferase, at 506960 to 510896 10647 mRNA_2280: 10648 - HMMPfam-B-block binding subunit of TFIIIC-PF04182, at 511379 to 518850 10648
Group Condition mRNA_2276 mRNA_2277 mRNA_2278 mRNA_2279 mRNA_2280
10644
10645
10646
10647
10648
facs on lipid accumulation Sorted High BODIPY Gate   -0.2 -0.5 -1.7  
growth on oleic acid YNB Glucose   -0.2 -0.3 -1.7  
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.4 -0.4 -1.4  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.3 -0.2 -1.6  
growth on ricinoleic acid YNB Ricinoleic Acid   0.2 0.1 -2.2  
auxotrophy Dropout Complete   0.2 0.2 -2.2  
auxotrophy YNB Glucose 75mM Methionine   0.1 0.0 -1.9  
auxotrophy YNB Glucose 75mM Arginine   0.2 0.2 -1.9  
growth on oleic acid YNB Oleic Acid   0.1 -0.4 -1.1  
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 -0.1 -1.2  
auxotrophy YNB Glucose   0.1 0.2 -1.7  
growth on ricinoleic acid YNB Glucose   0.2 0.1 -1.7  
growth on ricinoleic acid YNB Methylricinoleic Acid   0.2 0.4 -1.9  
facs on lipid accumulation Sorted Low BODIPY Gate   -0.4 0.2 -1.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.2 -0.4 -0.5  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.3 -0.3 -0.9  
growth on ypd YPD   0.1 -0.6 -0.0  
ypd buoyancy 40 hrs Median Buoyancy   -0.0 0.1 -0.2  
ypd buoyancy 40 hrs No Buoyancy Separation   0.2 0.2 -0.2  
ypd buoyancy 40 hrs Low Buoyancy   -0.1 0.5 0.0  
ypd buoyancy 40 hrs High Buoyancy   -0.0 0.5 -0.1  
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