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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2274: 10642 - KOG2352 Predicted spermine/spermidine synthase, at 499245 to 500264
10642
mRNA_2275: 10643 - HMMPfam-MAPEG family-PF01124,SUPERFAMILY--SSF161084, at 500597 to 501422
10643
mRNA_2276: 10644 - K02954 RP-S14, MRPS14, rpsN small subunit ribosomal protein S14, at 501721 to 502247
10644
mRNA_2277: 10645 - K13717 OTUD3 OTU domain-containing protein 3, at 502464 to 504545
10645
mRNA_2278: 10646 - KOG1118 Lysophosphatidic acid acyltransferase endophilin/SH3GL, involved in synaptic vesicle formation, at 504709 to 506668
10646
Group
Condition
mRNA_2274
mRNA_2275
mRNA_2276
mRNA_2277
mRNA_2278
10642
10643
10644
10645
10646
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.1
-0.2
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.3
-0.1
-0.1
growth on ypd
YPD
-0.0
-0.3
0.1
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.4
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.0
-0.7
0.2
0.2
growth on oleic acid
YNB Glucose
0.6
-0.5
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.8
-0.4
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.3
-0.4
0.2
growth on ricinoleic acid
YNB Glucose
0.0
-0.5
0.2
0.1
growth on oleic acid
YNB Oleic Acid
0.4
-0.2
0.1
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
0.6
-0.2
-0.4
auxotrophy
Dropout Complete
0.1
-0.4
0.2
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.1
0.1
0.0
auxotrophy
YNB Glucose
0.1
-0.3
0.1
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.4
0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.5
0.3
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.0
-0.1
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.4
0.1
-0.0
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.6
-0.1
0.2
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
-0.2
0.2
0.4
ypd buoyancy
40 hrs High Buoyancy
0.6
0.1
-0.0
0.5
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