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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2253: 10621 - HMMPfam-Staphylococcal nuclease homologue-PF00565,ProSiteProfiles-Thermonuclease domain profile.-PS50830,SMART-Staphylococcal nuclease homologues-SM00318,SUPERFAMILY--SSF50199, at 468849 to 469968
10621
mRNA_2254: 10622 - K17822 DCUN1D1_2 DCN1-like protein 1/2, at 470196 to 471391
10622
mRNA_2255: 10623 - Hypothetical Protein, at 471819 to 472358
10623
mRNA_2256: 10624 - K14293 KPNB1, IPO1 importin subunit beta-1, at 472511 to 475600
10624
mRNA_2257: 10625 - K12626 LSM7 U6 snRNA-associated Sm-like protein LSm7, at 475904 to 476538
10625
Group
Condition
mRNA_2253
mRNA_2254
mRNA_2255
mRNA_2256
mRNA_2257
10621
10622
10623
10624
10625
growth on ricinoleic acid
YNB Glucose
0.0
-0.9
auxotrophy
Dropout Complete
0.2
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
-1.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.8
growth on oleic acid
YNB Oleic Acid
0.1
-0.6
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.9
growth on oleic acid
YNB Glucose
0.2
-0.6
auxotrophy
YNB Glucose
0.3
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.0
growth on ypd
YPD
0.4
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
0.8
ypd buoyancy
40 hrs High Buoyancy
0.2
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.6
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