Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2251: 10619 - KOG3313 Molecular chaperone Prefoldin, subunit 3, at 466202 to 467815 10619 mRNA_2252: 10620 - HMMPfam-Signal recognition particle 9 kDa protein (SRP9)-PF05486,SUPERFAMILY--SSF54762, at 468078 to 468584 10620 mRNA_2253: 10621 - HMMPfam-Staphylococcal nuclease homologue-PF00565,ProSiteProfiles-Thermonuclease domain profile.-PS50830,SMART-Staphylococcal nuclease homologues-SM00318,SUPERFAMILY--SSF50199, at 468849 to 469968 10621 mRNA_2254: 10622 - K17822 DCUN1D1_2 DCN1-like protein 1/2, at 470196 to 471391 10622 mRNA_2255: 10623 - Hypothetical Protein, at 471819 to 472358 10623
Group Condition mRNA_2251 mRNA_2252 mRNA_2253 mRNA_2254 mRNA_2255
10619
10620
10621
10622
10623
ypd buoyancy 40 hrs No Buoyancy Separation -1.5   -0.5 0.8  
growth on oleic acid YNB Oleic Acid -0.6   0.1 -0.6  
facs on lipid accumulation Sorted No BODIPY Gate -1.1   0.2 -0.1  
auxotrophy Dropout Complete -0.1   0.2 -1.0  
facs on lipid accumulation Sorted High BODIPY Gate -1.2   0.1 0.2  
facs on lipid accumulation Sorted Low BODIPY Gate -0.6   -0.2 -0.0  
auxotrophy YNB Glucose -0.4   0.3 -0.7  
auxotrophy YNB Glucose 75mM Arginine -0.2   0.4 -0.9  
growth on oleic acid YNB Glucose -0.1   0.2 -0.6  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0   -0.3 -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5   0.2 -0.8  
growth on ricinoleic acid YNB Glucose 0.8   0.0 -0.9  
ypd buoyancy 40 hrs High Buoyancy -0.4   0.2 0.2  
auxotrophy YNB Glucose 75mM Methionine -0.2   0.3 -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.9   0.5 -1.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2   0.0 0.5  
growth on ypd YPD 0.6   0.4 -0.6  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2   0.1 0.2  
ypd buoyancy 40 hrs Median Buoyancy 0.6   0.1 0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5   -0.1 0.6  
ypd buoyancy 40 hrs Low Buoyancy 0.7   -0.0 0.5  
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