Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2250: 10618 - HMMPfam-Apolipoprotein O-PF09769, at 464729 to 465798 10618 mRNA_2251: 10619 - KOG3313 Molecular chaperone Prefoldin, subunit 3, at 466202 to 467815 10619 mRNA_2252: 10620 - HMMPfam-Signal recognition particle 9 kDa protein (SRP9)-PF05486,SUPERFAMILY--SSF54762, at 468078 to 468584 10620 mRNA_2253: 10621 - HMMPfam-Staphylococcal nuclease homologue-PF00565,ProSiteProfiles-Thermonuclease domain profile.-PS50830,SMART-Staphylococcal nuclease homologues-SM00318,SUPERFAMILY--SSF50199, at 468849 to 469968 10621 mRNA_2254: 10622 - K17822 DCUN1D1_2 DCN1-like protein 1/2, at 470196 to 471391 10622
Group Condition mRNA_2250 mRNA_2251 mRNA_2252 mRNA_2253 mRNA_2254
10618
10619
10620
10621
10622
growth on oleic acid YNB Oleic Acid -0.3 -0.6   0.1 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -1.5   -0.5 0.8
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.6   -0.2 -0.0
auxotrophy YNB Glucose -0.0 -0.4   0.3 -0.7
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2   0.4 -0.9
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -1.1   0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 0.5   0.2 -0.8
auxotrophy Dropout Complete 0.2 -0.1   0.2 -1.0
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -1.2   0.1 0.2
growth on ricinoleic acid YNB Glucose -0.4 0.8   0.0 -0.9
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 0.9   0.5 -1.1
growth on oleic acid YNB Glucose 0.1 -0.1   0.2 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.0   -0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.4   0.2 0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2   0.3 -0.1
growth on ypd YPD -0.0 0.6   0.4 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.2   0.0 0.5
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.6   0.1 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 0.2   0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.5   -0.1 0.6
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.7   -0.0 0.5
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