Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_2244: 10612 - KOG4120 G/T mismatch-specific thymine DNA glycosylase, at 452902 to 454246 10612 mRNA_2245: 10613 - K00134 GAPDH, gapA glyceraldehyde 3-phosphate dehydrogenase, at 455190 to 456884 10613 mRNA_2246: 10614 - K00026 MDH2 malate dehydrogenase, at 457247 to 458914 10614 mRNA_2247: 10615 - Hypothetical Protein, at 459109 to 460029 10615 mRNA_2248: 10616 - K01338 lon ATP-dependent Lon protease, at 460381 to 463216 10616
Group Condition mRNA_2244 mRNA_2245 mRNA_2246 mRNA_2247 mRNA_2248
10612
10613
10614
10615
10616
auxotrophy YNB Glucose -0.7   -1.1 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2   -1.0 0.0 -0.6
auxotrophy YNB Glucose 75mM Methionine 0.2   -1.5 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3   -1.2 -0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6   -0.1 -0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.7   -0.8 -0.3 0.4
ypd buoyancy 40 hrs No Buoyancy Separation -1.3   -0.1 0.6 -0.3
growth on oleic acid YNB Oleic Acid -0.4   -0.6 0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9   -0.1 0.2 -0.3
growth on ypd YPD -0.5   -0.2 -0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.1   -0.5 0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1   -0.3 -0.2 -0.1
auxotrophy Dropout Complete -0.1   -0.4 -0.1 -0.0
growth on oleic acid YNB Glucose 0.0   -1.0 0.0 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5   0.4 0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.6   0.0 -0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.0   0.0 0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.1   0.0 0.2 -0.0
growth on ricinoleic acid YNB Glucose 0.9   -1.3 -0.1 0.9
growth on ricinoleic acid YNB Ricinoleic Acid 0.9   -0.2 -0.2 1.0
growth on ricinoleic acid YNB Methylricinoleic Acid 1.3   -0.5 0.1 0.9
remove
mRNA_2244
plot		 remove
mRNA_2245
plot		 remove
mRNA_2246		 remove
mRNA_2247
plot		 remove
mRNA_2248
plot