Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2243: 10611 - SUPERFAMILY--SSF52266, at 450168 to 452098 10611 mRNA_2244: 10612 - KOG4120 G/T mismatch-specific thymine DNA glycosylase, at 452902 to 454246 10612 mRNA_2245: 10613 - K00134 GAPDH, gapA glyceraldehyde 3-phosphate dehydrogenase, at 455190 to 456884 10613 mRNA_2246: 10614 - K00026 MDH2 malate dehydrogenase, at 457247 to 458914 10614 mRNA_2247: 10615 - Hypothetical Protein, at 459109 to 460029 10615
Group Condition mRNA_2243 mRNA_2244 mRNA_2245 mRNA_2246 mRNA_2247
10611
10612
10613
10614
10615
auxotrophy YNB Glucose -0.2 -0.7   -1.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 0.2   -1.5 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3   -1.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.7   -0.8 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2   -1.0 0.0
growth on oleic acid YNB Glucose -0.1 0.0   -1.0 0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.4   -0.6 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.9   -0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.6   -0.1 -0.1
auxotrophy Dropout Complete -0.1 -0.1   -0.4 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -1.3   -0.1 0.6
growth on ricinoleic acid YNB Glucose -0.1 0.9   -1.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.1   -0.5 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.1   -0.3 -0.2
growth on ypd YPD 0.6 -0.5   -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.0   0.0 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.5   0.4 0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1   0.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.9   -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.6   0.0 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 1.3   -0.5 0.1
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