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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2238: 10606 - K20813 TDG thymine-DNA glycosylase, at 436751 to 438235
10606
mRNA_2239: 10607 - K18163 NDUFAF6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6, at 438330 to 439601
10607
mRNA_2240: 10608 - K13291 TUT terminal uridylyltransferase, at 440002 to 443977
10608
mRNA_2241: 10609 - K12572 PAN3 PAB-dependent poly(A)-specific ribonuclease subunit 3, at 444470 to 447596
10609
mRNA_2242: 10610 - Hypothetical Protein, at 448063 to 449685
10610
Group
Condition
mRNA_2238
mRNA_2239
mRNA_2240
mRNA_2241
mRNA_2242
10606
10607
10608
10609
10610
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-3.3
-1.3
0.7
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-1.1
-0.2
-0.5
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-2.8
-0.6
1.5
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.5
-0.3
-0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-1.3
0.2
0.1
0.1
auxotrophy
YNB Glucose
-0.0
-0.7
-0.6
0.3
0.0
growth on ricinoleic acid
YNB Glucose
-0.0
-1.0
-0.1
0.4
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.4
-0.3
-0.1
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.4
-0.6
0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.5
-0.4
0.3
-0.1
auxotrophy
Dropout Complete
0.3
-0.3
-0.4
0.6
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.5
-0.7
0.1
0.1
growth on oleic acid
YNB Glucose
-0.2
-0.0
0.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.1
0.1
0.4
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.6
0.4
0.5
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.6
-0.4
1.1
-0.2
growth on ypd
YPD
0.0
0.4
-0.2
0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.1
0.0
0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
0.4
-0.2
-0.3
0.3
growth on oleic acid
YNB Oleic Acid
0.2
-0.2
-0.1
0.5
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.4
0.4
0.6
0.1
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