Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2237: 10605 - KOG1794 N-Acetylglucosamine kinase, at 435285 to 436613 10605 mRNA_2238: 10606 - K20813 TDG thymine-DNA glycosylase, at 436751 to 438235 10606 mRNA_2239: 10607 - K18163 NDUFAF6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6, at 438330 to 439601 10607 mRNA_2240: 10608 - K13291 TUT terminal uridylyltransferase, at 440002 to 443977 10608 mRNA_2241: 10609 - K12572 PAN3 PAB-dependent poly(A)-specific ribonuclease subunit 3, at 444470 to 447596 10609
Group Condition mRNA_2237 mRNA_2238 mRNA_2239 mRNA_2240 mRNA_2241
10605
10606
10607
10608
10609
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.4 -3.3 -1.3 0.7
facs on lipid accumulation Sorted High BODIPY Gate 0.6 -0.5 -1.1 -0.2 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.1 -2.8 -0.6 1.5
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 -0.5 -0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.1 -1.3 0.2 0.1
auxotrophy YNB Glucose -0.3 -0.0 -0.7 -0.6 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 0.2 0.5 -0.7 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.2 -0.4 -0.3 -0.1
growth on ricinoleic acid YNB Glucose 0.3 -0.0 -1.0 -0.1 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.4 -0.6 0.4 0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 0.2 0.4 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.4 -0.1 0.1 0.4
auxotrophy YNB Glucose 75mM Arginine 0.0 0.3 -0.5 -0.4 0.3
auxotrophy YNB Glucose 75mM Methionine 0.3 0.3 -0.4 -0.6 0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.2 -0.6 -0.4 1.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.2 -0.1 0.0 0.1
auxotrophy Dropout Complete -0.1 0.3 -0.3 -0.4 0.6
growth on oleic acid YNB Glucose 0.5 -0.2 -0.0 0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.2 -0.4 0.4 0.6
growth on ypd YPD 0.4 0.0 0.4 -0.2 0.0
growth on oleic acid YNB Oleic Acid 0.4 0.2 -0.2 -0.1 0.5
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