Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2234: 10602 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 428001 to 429735 10602 mRNA_2235: 10603 - K11843 USP14, UBP6 ubiquitin carboxyl-terminal hydrolase 14, at 430392 to 432550 10603 mRNA_2236: 10604 - KOG3098 Uncharacterized conserved protein, at 432656 to 434707 10604 mRNA_2237: 10605 - KOG1794 N-Acetylglucosamine kinase, at 435285 to 436613 10605 mRNA_2238: 10606 - K20813 TDG thymine-DNA glycosylase, at 436751 to 438235 10606
Group Condition mRNA_2234 mRNA_2235 mRNA_2236 mRNA_2237 mRNA_2238
10602
10603
10604
10605
10606
facs on lipid accumulation Sorted No BODIPY Gate   -2.0 -0.4 -0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   -1.3 -0.7 -0.4 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.6 -0.3 -0.4 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.3 -0.5 -0.4 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid   -0.4 -0.2 -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy   -0.1 -0.3 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.1 0.1 -0.9 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.6 -0.1 -0.2 0.2
growth on ricinoleic acid YNB Glucose   -0.4 -0.4 0.3 -0.0
facs on lipid accumulation Sorted High BODIPY Gate   -0.3 -0.2 0.6 -0.5
growth on ypd YPD   -0.7 -0.2 0.4 0.0
ypd buoyancy 40 hrs High Buoyancy   -0.3 -0.1 0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy   -0.1 -0.1 -0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   0.6 -0.7 -0.0 0.1
growth on oleic acid YNB Glucose   0.3 -0.2 0.5 -0.2
auxotrophy YNB Glucose   0.7 0.1 -0.3 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation   -0.3 1.2 -0.5 0.2
growth on oleic acid YNB Oleic Acid   0.4 -0.2 0.4 0.2
auxotrophy Dropout Complete   0.7 -0.1 -0.1 0.3
auxotrophy YNB Glucose 75mM Arginine   0.8 -0.1 0.0 0.3
auxotrophy YNB Glucose 75mM Methionine   0.7 0.2 0.3 0.3
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