Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2232: 10600 - Hypothetical Protein, at 424627 to 425038 10600 mRNA_2233: 10601 - Hypothetical Protein, at 425112 to 425465 10601 mRNA_2234: 10602 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 428001 to 429735 10602 mRNA_2235: 10603 - K11843 USP14, UBP6 ubiquitin carboxyl-terminal hydrolase 14, at 430392 to 432550 10603 mRNA_2236: 10604 - KOG3098 Uncharacterized conserved protein, at 432656 to 434707 10604
Group Condition mRNA_2232 mRNA_2233 mRNA_2234 mRNA_2235 mRNA_2236
10600
10601
10602
10603
10604
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 -2.1   -0.6 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.6 -0.8   -0.6 -0.1
growth on ypd YPD -0.6 -1.2   -0.7 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.5 -0.0   -2.0 -0.4
growth on ricinoleic acid YNB Glucose -0.0 -0.9   -0.4 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 0.9   -1.3 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -1.2   -0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.0   -0.3 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -1.1   0.6 -0.7
growth on oleic acid YNB Oleic Acid -0.1 -0.4   0.4 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.3   -0.1 0.1
auxotrophy YNB Glucose 75mM Methionine 0.6 -1.0   0.7 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.5 0.6   -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 1.4   -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.5 -0.4   0.8 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.6   -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 1.3   -0.1 -0.3
growth on oleic acid YNB Glucose 0.6 0.4   0.3 -0.2
auxotrophy Dropout Complete -0.1 0.7   0.7 -0.1
auxotrophy YNB Glucose 0.2 0.3   0.7 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 1.2 -0.4   -0.3 1.2
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