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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2231: 10599 - Hypothetical Protein, at 422342 to 422815
10599
mRNA_2232: 10600 - Hypothetical Protein, at 424627 to 425038
10600
mRNA_2233: 10601 - Hypothetical Protein, at 425112 to 425465
10601
mRNA_2234: 10602 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 428001 to 429735
10602
mRNA_2235: 10603 - K11843 USP14, UBP6 ubiquitin carboxyl-terminal hydrolase 14, at 430392 to 432550
10603
Group
Condition
mRNA_2231
mRNA_2232
mRNA_2233
mRNA_2234
mRNA_2235
10599
10600
10601
10602
10603
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
-2.1
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.6
-0.8
-0.6
growth on ypd
YPD
-0.6
-1.2
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
-0.0
-2.0
growth on ricinoleic acid
YNB Glucose
-0.0
-0.9
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-1.2
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
0.9
-1.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.0
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-1.1
0.6
growth on oleic acid
YNB Oleic Acid
-0.1
-0.4
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.6
-1.0
0.7
ypd buoyancy
40 hrs No Buoyancy Separation
1.2
-0.4
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
0.6
-0.3
auxotrophy
YNB Glucose 75mM Arginine
0.5
-0.4
0.8
ypd buoyancy
40 hrs Median Buoyancy
0.4
0.6
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
1.4
-0.3
auxotrophy
YNB Glucose
0.2
0.3
0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.0
1.3
-0.1
auxotrophy
Dropout Complete
-0.1
0.7
0.7
growth on oleic acid
YNB Glucose
0.6
0.4
0.3
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