Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2228: 10596 - K14191 DIM1 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase, at 412387 to 413949 10596 mRNA_2229: 10597 - HMMPfam-Hsp70 protein-PF00012,PRINTS-70kDa heat shock protein signature-PR00301,ProSitePatterns-Heat shock hsp70 proteins family signature 2.-PS00329,ProSitePatterns-Heat shock hsp70 proteins family signature 3.-PS01036,SUPERFAMILY--SSF100934,SUPERFAMILY--SSF53067, at 416574 to 419223 10597 mRNA_2230: 10598 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112, at 419903 to 421996 10598 mRNA_2231: 10599 - Hypothetical Protein, at 422342 to 422815 10599 mRNA_2232: 10600 - Hypothetical Protein, at 424627 to 425038 10600
Group Condition mRNA_2228 mRNA_2229 mRNA_2230 mRNA_2231 mRNA_2232
10596
10597
10598
10599
10600
facs on lipid accumulation Sorted Low BODIPY Gate   0.1 -0.8   -0.7
auxotrophy YNB Glucose   -0.4 -1.1   0.2
auxotrophy YNB Glucose 75mM Methionine   -0.4 -1.2   0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.4 1.0   -1.6
growth on oleic acid YNB Oleic Acid   -0.1 -0.5   -0.1
auxotrophy Dropout Complete   -0.4 -0.1   -0.1
auxotrophy YNB Glucose 75mM Arginine   -0.7 -0.3   0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.3 0.3   -0.4
ypd buoyancy 40 hrs High Buoyancy   -0.4 0.5   -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.3 1.0   -0.8
growth on ricinoleic acid YNB Glucose   0.6 -0.6   -0.0
growth on oleic acid YNB Glucose   -0.2 -0.4   0.6
growth on ypd YPD   -0.1 0.7   -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid   0.4 -0.4   0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.0 0.1   0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 1.1   -0.3
ypd buoyancy 40 hrs No Buoyancy Separation   -0.6 0.4   1.2
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 0.6   0.5
growth on ricinoleic acid YNB Ricinoleic Acid   0.3 0.5   0.3
ypd buoyancy 40 hrs Low Buoyancy   -0.1 1.3   -0.0
ypd buoyancy 40 hrs Median Buoyancy   0.1 0.8   0.4
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