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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2222: 10590 - K14801 TSR4 pre-rRNA-processing protein TSR4, at 394063 to 398428
10590
mRNA_2223: 10591 - Hypothetical Protein, at 398551 to 400277
10591
mRNA_2224: 10592 - KOG2653 6-phosphogluconate dehydrogenase, at 400569 to 403367
10592
mRNA_2225: 10593 - Hypothetical Protein, at 403974 to 404899
10593
mRNA_2226: 10594 - SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717, at 405486 to 409218
10594
Group
Condition
mRNA_2222
mRNA_2223
mRNA_2224
mRNA_2225
mRNA_2226
10590
10591
10592
10593
10594
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.5
-0.3
-1.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.4
-0.5
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.6
0.0
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.4
0.1
-0.2
growth on ricinoleic acid
YNB Glucose
0.1
-0.2
-0.3
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.3
0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.2
0.1
-0.8
growth on oleic acid
YNB Glucose
0.0
0.1
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.1
0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.0
-0.3
0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.0
-0.0
-0.1
auxotrophy
Dropout Complete
-0.3
0.2
0.0
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
-0.3
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
0.1
0.0
0.2
growth on ypd
YPD
0.1
0.0
-0.0
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.2
-0.2
0.1
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
-0.2
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.2
0.1
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
0.2
0.0
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.2
-0.1
0.5
auxotrophy
YNB Glucose
-0.1
0.2
0.2
0.2
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