Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2215: 10583 - K01737 queD, ptpS, PTS 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase, at 379007 to 379807 10583 mRNA_2216: 10584 - BLAST Oligosaccharide translocation protein RFT1 [Termitomy..., at 380175 to 381550 10584 mRNA_2217: 10585 - KOG2199 Signal transducing adaptor protein STAM/STAM2, at 382345 to 384541 10585 mRNA_2218: 10586 - SUPERFAMILY--SSF52047, at 384694 to 386223 10586 mRNA_2219: 10587 - Hypothetical Protein, at 386723 to 388300 10587
Group Condition mRNA_2215 mRNA_2216 mRNA_2217 mRNA_2218 mRNA_2219
10583
10584
10585
10586
10587
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 -0.6 -0.0 0.1 -0.7
growth on oleic acid YNB Glucose 0.3 -1.0 -0.4 -0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 -0.9 0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.0 -0.5 0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.6 -0.1 -0.4 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.2 0.2 0.1 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.0 0.1 -0.1 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.2 -1.0 0.1 0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.6 -0.2 0.4 -0.2
auxotrophy YNB Glucose 0.2 -0.2 -0.3 -0.2 0.2
growth on ricinoleic acid YNB Glucose -0.1 -0.3 -0.8 0.3 0.7
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.4 -0.2 -0.1 0.4
auxotrophy Dropout Complete -0.2 0.2 -0.3 -0.2 0.5
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 -0.0 -0.2 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.4 0.1 0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.1 -0.4 -0.2 0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 0.0 -0.1 -0.2 0.6
growth on ypd YPD -0.1 0.4 0.2 -0.2 0.2
growth on oleic acid YNB Oleic Acid 0.6 -0.0 -0.3 -0.1 0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.1 -0.1 0.2 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.1 0.7 -0.1 1.2
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