Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2211: 10579 - K09486 HYOU1 hypoxia up-regulated 1, at 367556 to 370614 10579 mRNA_2212: 10580 - K04441 P38 p38 MAP kinase, at 371280 to 373458 10580 mRNA_2213: 10581 - Hypothetical Protein, at 373795 to 375886 10581 mRNA_2214: 10582 - K06970 rlmF 23S rRNA (adenine1618-N6)-methyltransferase, at 376563 to 378868 10582 mRNA_2215: 10583 - K01737 queD, ptpS, PTS 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase, at 379007 to 379807 10583
Group Condition mRNA_2211 mRNA_2212 mRNA_2213 mRNA_2214 mRNA_2215
10579
10580
10581
10582
10583
auxotrophy Dropout Complete -0.6 -2.9 -0.2   -0.2
auxotrophy YNB Glucose 75mM Methionine -0.5 -3.4 -0.2   0.2
growth on ricinoleic acid YNB Glucose -0.5 -3.1 0.1   -0.1
auxotrophy YNB Glucose 0.3 -3.4 -0.1   0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.1 -0.8 0.1   -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -2.2 0.6   -0.3
growth on oleic acid YNB Glucose -0.5 -1.8 -0.0   0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.8 -0.1   -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -2.3 0.4 0.3   0.1
growth on oleic acid YNB Oleic Acid -0.7 -1.6 0.3   0.6
auxotrophy YNB Glucose 75mM Arginine 0.6 -2.0 0.0   0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -2.1 0.8   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 0.1 -0.2   -0.4
facs on lipid accumulation Sorted No BODIPY Gate -1.0 0.1 0.1   0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 0.5 0.2   -0.2
ypd buoyancy 40 hrs Low Buoyancy -1.0 0.1 0.4   0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.0 0.2   -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.7 -0.9 0.6   0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5 0.9 0.1   0.1
growth on ypd YPD 0.7 -0.0 0.0   -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 0.9 0.1   -0.1
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