Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2207: 10575 - K08284 MID1 calcium channel MID1, at 353107 to 355052 10575 mRNA_2208: 10576 - K13621 BTA1 betaine lipid synthase, at 355291 to 358512 10576 mRNA_2209: 10577 - K14157 AASS alpha-aminoadipic semialdehyde synthase, at 359191 to 363010 10577 mRNA_2210: 10578 - K20407 MIOS, MIO WD repeat-containing protein mio, at 363303 to 367211 10578 mRNA_2211: 10579 - K09486 HYOU1 hypoxia up-regulated 1, at 367556 to 370614 10579
Group Condition mRNA_2207 mRNA_2208 mRNA_2209 mRNA_2210 mRNA_2211
10575
10576
10577
10578
10579
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.0 0.3 -0.4 -2.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.3 -0.4 -0.0 -1.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.4 -0.5 0.2 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.1 -0.6 0.1 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1 -0.2 0.0 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 0.2 -0.0 -1.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.3 0.0 -0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.2 0.1 0.2 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3 -0.3 -0.0 0.2
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.1 -0.0 0.1 -0.5
growth on oleic acid YNB Glucose 0.0 -0.1 -0.1 0.2 -0.5
growth on oleic acid YNB Oleic Acid 0.4 -0.1 -0.2 0.2 -0.7
auxotrophy Dropout Complete -0.0 -0.3 0.3 0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 0.1 -0.1 -0.1
growth on ricinoleic acid YNB Glucose 0.2 0.2 -0.3 0.5 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 0.1 0.0 0.6
auxotrophy YNB Glucose -0.1 -0.1 0.2 0.2 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.2 -0.2 0.6 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.0 -0.0 0.5 0.2
growth on ypd YPD 0.2 0.2 0.0 0.2 0.7
facs on lipid accumulation Sorted High BODIPY Gate 0.5 0.1 0.2 0.0 0.7
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