Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2206: 10574 - K20465 OSBPL9_10_11, ORP9_10_11 oxysterol-binding protein-related protein 9/10/11, at 350841 to 352829 10574 mRNA_2207: 10575 - K08284 MID1 calcium channel MID1, at 353107 to 355052 10575 mRNA_2208: 10576 - K13621 BTA1 betaine lipid synthase, at 355291 to 358512 10576 mRNA_2209: 10577 - K14157 AASS alpha-aminoadipic semialdehyde synthase, at 359191 to 363010 10577 mRNA_2210: 10578 - K20407 MIOS, MIO WD repeat-containing protein mio, at 363303 to 367211 10578
Group Condition mRNA_2206 mRNA_2207 mRNA_2208 mRNA_2209 mRNA_2210
10574
10575
10576
10577
10578
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.5 -0.1 -0.6 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 -0.3 -0.4 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 -0.3 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3 -0.1 -0.2 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.1 -0.4 -0.5 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.3 0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.1 -0.0 0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.1 0.2 -0.0
growth on oleic acid YNB Glucose -0.2 0.0 -0.1 -0.1 0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.2 -0.2 0.1 0.0
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.0 -0.0 0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.2 0.4 -0.1 -0.2 0.2
auxotrophy YNB Glucose 0.1 -0.1 -0.1 0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.0 -0.2 0.1 0.2
auxotrophy Dropout Complete 0.2 -0.0 -0.3 0.3 0.2
auxotrophy YNB Glucose 75mM Methionine 0.4 0.0 -0.1 -0.0 0.1
growth on ypd YPD -0.1 0.2 0.2 0.0 0.2
growth on ricinoleic acid YNB Glucose 0.1 0.2 0.2 -0.3 0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.5 -0.0 -0.0 0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.4 0.2 -0.2 0.6
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.5 0.1 0.2 0.0
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