Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2204: 10572 - K03786 aroQ, qutE 3-dehydroquinate dehydratase II, at 347838 to 348942 10572 mRNA_2205: 10573 - KOG0381 HMG box-containing protein, at 349439 to 350135 10573 mRNA_2206: 10574 - K20465 OSBPL9_10_11, ORP9_10_11 oxysterol-binding protein-related protein 9/10/11, at 350841 to 352829 10574 mRNA_2207: 10575 - K08284 MID1 calcium channel MID1, at 353107 to 355052 10575 mRNA_2208: 10576 - K13621 BTA1 betaine lipid synthase, at 355291 to 358512 10576
Group Condition mRNA_2204 mRNA_2205 mRNA_2206 mRNA_2207 mRNA_2208
10572
10573
10574
10575
10576
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2   -0.2 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2   -0.1 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5   0.1 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0   -0.1 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1   -0.1 -0.1 -0.3
growth on oleic acid YNB Glucose -0.0   -0.2 0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2   -0.0 -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.0   0.1 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1   0.1 -0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy 0.1   -0.1 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2   -0.0 -0.1 -0.3
growth on ypd YPD -0.4   -0.1 0.2 0.2
auxotrophy Dropout Complete 0.2   0.2 -0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.1   0.1 -0.0 -0.0
growth on oleic acid YNB Oleic Acid -0.0   -0.2 0.4 -0.1
auxotrophy YNB Glucose 0.3   0.1 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0   0.4 0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.3   -0.1 0.5 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3   -0.3 0.4 0.2
growth on ricinoleic acid YNB Glucose 0.3   0.1 0.2 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.5   0.2 0.5 0.1
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