Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2202: 10570 - K00365 uaZ urate oxidase, at 341518 to 342881 10570 mRNA_2203: 10571 - K13339 PEX6, PXAAA1 peroxin-6, at 343203 to 347570 10571 mRNA_2204: 10572 - K03786 aroQ, qutE 3-dehydroquinate dehydratase II, at 347838 to 348942 10572 mRNA_2205: 10573 - KOG0381 HMG box-containing protein, at 349439 to 350135 10573 mRNA_2206: 10574 - K20465 OSBPL9_10_11, ORP9_10_11 oxysterol-binding protein-related protein 9/10/11, at 350841 to 352829 10574
Group Condition mRNA_2202 mRNA_2203 mRNA_2204 mRNA_2205 mRNA_2206
10570
10571
10572
10573
10574
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3   -0.2   -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0   -0.5   0.1
growth on ypd YPD 0.2   -0.4   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1   0.0   -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   -0.2   -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0   -0.1   -0.1
growth on oleic acid YNB Oleic Acid 0.2   -0.0   -0.2
growth on oleic acid YNB Glucose 0.3   -0.0   -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1   0.1   0.1
ypd buoyancy 40 hrs Low Buoyancy 0.3   0.1   -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2   0.3   -0.3
auxotrophy YNB Glucose 75mM Arginine 0.2   -0.0   0.1
ypd buoyancy 40 hrs High Buoyancy 0.3   0.1   0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.3   0.3   -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.4   0.2   -0.0
growth on ricinoleic acid YNB Glucose 0.3   0.3   0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1   0.5   0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.9   -0.2   -0.0
auxotrophy Dropout Complete 0.4   0.2   0.2
auxotrophy YNB Glucose 75mM Methionine 0.4   -0.0   0.4
auxotrophy YNB Glucose 0.5   0.3   0.1
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