Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2201: 10569 - K03005 RPA49, POLR1E DNA-directed RNA polymerase I subunit RPA49, at 339616 to 341199 10569 mRNA_2202: 10570 - K00365 uaZ urate oxidase, at 341518 to 342881 10570 mRNA_2203: 10571 - K13339 PEX6, PXAAA1 peroxin-6, at 343203 to 347570 10571 mRNA_2204: 10572 - K03786 aroQ, qutE 3-dehydroquinate dehydratase II, at 347838 to 348942 10572 mRNA_2205: 10573 - KOG0381 HMG box-containing protein, at 349439 to 350135 10573
Group Condition mRNA_2201 mRNA_2202 mRNA_2203 mRNA_2204 mRNA_2205
10569
10570
10571
10572
10573
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.0   -0.5  
growth on ypd YPD -0.4 0.2   -0.4  
facs on lipid accumulation Sorted High BODIPY Gate -0.8 -0.1   0.5  
ypd buoyancy 40 hrs High Buoyancy -0.6 0.3   0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1   0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0   -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.1   -0.2  
growth on oleic acid YNB Glucose -0.2 0.3   -0.0  
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.3   0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.1   0.1  
auxotrophy YNB Glucose 75mM Arginine 0.1 0.2   -0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.8 -0.3   -0.2  
growth on ricinoleic acid YNB Glucose -0.2 0.3   0.3  
growth on oleic acid YNB Oleic Acid 0.2 0.2   -0.0  
auxotrophy Dropout Complete -0.2 0.4   0.2  
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.4   0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.2   0.3  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.3   0.3  
auxotrophy YNB Glucose 0.0 0.5   0.3  
auxotrophy YNB Glucose 75mM Methionine 0.6 0.4   -0.0  
ypd buoyancy 40 hrs No Buoyancy Separation 0.8 0.9   -0.2  
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