Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2200: 10568 - K11423 SETD2, SET2 histone-lysine N-methyltransferase SETD2, at 335567 to 339379 10568 mRNA_2201: 10569 - K03005 RPA49, POLR1E DNA-directed RNA polymerase I subunit RPA49, at 339616 to 341199 10569 mRNA_2202: 10570 - K00365 uaZ urate oxidase, at 341518 to 342881 10570 mRNA_2203: 10571 - K13339 PEX6, PXAAA1 peroxin-6, at 343203 to 347570 10571 mRNA_2204: 10572 - K03786 aroQ, qutE 3-dehydroquinate dehydratase II, at 347838 to 348942 10572
Group Condition mRNA_2200 mRNA_2201 mRNA_2202 mRNA_2203 mRNA_2204
10568
10569
10570
10571
10572
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -0.5 -0.0   -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.1 -0.1 -0.0   -0.1
growth on ypd YPD -0.4 -0.4 0.2   -0.4
ypd buoyancy 40 hrs High Buoyancy -0.7 -0.6 0.3   0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.8 -0.1   0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.1 -0.1   0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 0.8 -0.3   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.1 0.1   -0.2
growth on oleic acid YNB Glucose -0.1 -0.2 0.3   -0.0
growth on oleic acid YNB Oleic Acid -0.3 0.2 0.2   -0.0
auxotrophy Dropout Complete -0.3 -0.2 0.4   0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.1 0.1   0.1
growth on ricinoleic acid YNB Glucose 0.1 -0.2 0.3   0.3
auxotrophy YNB Glucose 75mM Arginine 0.2 0.1 0.2   -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.4 -0.2 0.3   0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.0 0.4   0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 0.6 0.4   -0.0
auxotrophy YNB Glucose 0.2 0.0 0.5   0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.1 0.2   0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 0.1 0.3   0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.8 0.9   -0.2
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