Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2193: 10561 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 310220 to 312834 10561 mRNA_2194: 10562 - BLAST ER to Golgi transport-related protein, putative [Cryp..., at 313322 to 318107 10562 mRNA_2195: 10563 - HMMPfam-Subtilase family-PF00082,HMMPfam-PA domain-PF02225,HMMPfam-Fn3-like domain (DUF1034)-PF06280,PRINTS-Subtilisin serine protease family (S8) signature-PR00723,ProSitePatterns-Serine proteases, subtilase family, aspartic acid active site.-PS00136,ProSitePatterns-Serine proteases, subtilase family, histidine active site.-PS00137,SUPERFAMILY--SSF52025,SUPERFAMILY--SSF52743, at 319466 to 323008 10563 mRNA_2196: 10564 - HMMPfam-Bromodomain associated-PF07524, at 323325 to 326120 10564 mRNA_2197: 10565 - K20042 FCHO F-BAR domain only protein, at 326896 to 330044 10565
Group Condition mRNA_2193 mRNA_2194 mRNA_2195 mRNA_2196 mRNA_2197
10561
10562
10563
10564
10565
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.3 0.2 0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.1 -0.1 -0.3 -0.4
growth on oleic acid YNB Glucose 0.2 0.1 0.2 -0.4 -0.5
auxotrophy YNB Glucose 75mM Methionine 0.3 0.0 0.0 0.0 -0.6
growth on ricinoleic acid YNB Glucose 0.2 0.2 -0.2 -0.5 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.1 -0.0 -0.0 -0.1
growth on oleic acid YNB Oleic Acid 0.2 -0.1 0.1 -0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 0.3 -0.1 0.9 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 0.1 -0.4 0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.0 -0.1 0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 -0.1 0.2 -0.1
auxotrophy Dropout Complete 0.5 -0.1 0.0 0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine 0.6 -0.1 0.1 0.1 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.3 -0.0 0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.0 0.1 0.1 0.1
auxotrophy YNB Glucose 0.7 -0.1 0.1 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.0 -0.2 0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.2 -0.0 -0.0 0.4
growth on ypd YPD 0.6 0.0 0.0 -0.4 0.2
ypd buoyancy 40 hrs High Buoyancy 0.0 0.0 0.0 0.3 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.1 0.1 0.4 -0.4
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