Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2188: 10556 - Hypothetical Protein, at 294159 to 294788 10556 mRNA_2189: 10557 - K11236 CDC24 cell division control protein 24, at 296049 to 299793 10557 mRNA_2190: 10558 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 301262 to 303174 10558 mRNA_2191: 10559 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048, at 304016 to 306697 10559 mRNA_2192: 10560 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 306918 to 310071 10560
Group Condition mRNA_2188 mRNA_2189 mRNA_2190 mRNA_2191 mRNA_2192
10556
10557
10558
10559
10560
ypd buoyancy 40 hrs No Buoyancy Separation   -1.0 -0.4 -0.4 0.5
facs on lipid accumulation Sorted Low BODIPY Gate   0.2 -0.7 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.5 -0.3 0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.3 -0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.5 -0.2 -0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy   0.4 -0.0 -0.0 0.2
ypd buoyancy 40 hrs Low Buoyancy   1.0 -0.4 -0.1 -0.1
growth on oleic acid YNB Glucose   0.8 0.1 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.9 0.1 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy   0.5 0.2 0.1 0.1
auxotrophy YNB Glucose 75mM Methionine   1.2 -0.1 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine   1.1 -0.0 -0.0 -0.1
growth on oleic acid YNB Oleic Acid   1.2 0.1 -0.1 -0.1
auxotrophy Dropout Complete   1.2 -0.0 0.1 -0.2
growth on ypd YPD   0.8 0.3 0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate   1.0 -0.1 0.3 -0.1
auxotrophy YNB Glucose   1.2 -0.0 0.1 -0.2
growth on ricinoleic acid YNB Glucose   1.0 0.5 -0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   2.1 -0.0 -0.3 0.1
facs on lipid accumulation Sorted High BODIPY Gate   1.8 0.3 0.4 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid   2.9 0.5 -0.1 0.1
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