Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_2185: 10553 - HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879, at 288686 to 288844 10553 mRNA_2186: 10554 - K06316 RFT1 oligosaccharide translocation protein RFT1, at 289914 to 291585 10554 mRNA_2187: 10555 - K09602 OTUB1 ubiquitin thioesterase protein OTUB1, at 291957 to 293217 10555 mRNA_2188: 10556 - Hypothetical Protein, at 294159 to 294788 10556 mRNA_2189: 10557 - K11236 CDC24 cell division control protein 24, at 296049 to 299793 10557
Group Condition mRNA_2185 mRNA_2186 mRNA_2187 mRNA_2188 mRNA_2189
10553
10554
10555
10556
10557
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.0   -0.4   -0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.8   0.1   -1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8   -0.2   0.5
ypd buoyancy 40 hrs High Buoyancy -0.8   -0.1   0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3   -0.3   0.3
ypd buoyancy 40 hrs Median Buoyancy -0.4   0.0   0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4   -0.3   0.9
growth on ricinoleic acid YNB Glucose -0.3   0.4   1.0
ypd buoyancy 40 hrs Low Buoyancy 0.3   -0.1   1.0
growth on ypd YPD 0.8   -0.3   0.8
growth on oleic acid YNB Glucose 0.8   -0.1   0.8
growth on oleic acid YNB Oleic Acid 0.6   -0.2   1.2
facs on lipid accumulation Sorted Low BODIPY Gate 1.1   0.3   0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5   0.0   2.1
facs on lipid accumulation Sorted No BODIPY Gate 0.9   0.3   1.0
auxotrophy YNB Glucose 75mM Arginine 1.7   -0.4   1.1
auxotrophy YNB Glucose 75mM Methionine 1.5   -0.1   1.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.6   0.3   2.9
facs on lipid accumulation Sorted High BODIPY Gate 1.0   0.2   1.8
auxotrophy YNB Glucose 1.8   -0.1   1.2
auxotrophy Dropout Complete 2.3   -0.0   1.2
remove
mRNA_2185
plot		 remove
mRNA_2186
plot		 remove
mRNA_2187		 remove
mRNA_2188
plot		 remove
mRNA_2189
plot